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Independent project, not affiliated with Anthropic
anthropics avatar

Instrument Data To Allotrope

anthropics/knowledge-work-plugins
1.9k installs23.4k stars
Summary

Converts lab instrument outputs (PDFs, CSVs, Excel files) into Allotrope Simple Model JSON or flattened CSV for LIMS upload and data pipelines. Uses the allotropy library for native parsing when available, falls back to flexible extraction for unsupported formats. Outputs include validated ASM JSON with proper calculated data traceability, 2D CSV for systems that don't handle JSON, and exportable Python code for data engineers. The validation is intentionally soft on unknown units and techniques to stay forward compatible with Allotrope schema updates. Works well as a template you can extend with your own instrument formats or schema mappings through the references directory.

Install to Claude Code

npx -y skills add anthropics/knowledge-work-plugins --skill instrument-data-to-allotrope --agent claude-code

Installs into .claude/skills of the current project.

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Files
SKILL.md

Select a file.

Featured
CodeRabbit
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AI writes the code. CodeRabbit catches the slop.
Try For Free →
belt - the only tool your agent needs
belt - the only tool your agent needs
belt cli automatically finds the best tools and skills for your agent. image, video, music, tts...
one prompt install →
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Plug Mailtrap into your AI workflow and let it handle the email.
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CodeScene MCP ServerCodeScene MCP Server
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Categories
Code Review & QualityPythonOffice & Documents
First SeenMay 16, 2026
View on GitHub

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