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Built for the Claude Code community with Claude Code by @mertduzgun

Independent project, not affiliated with Anthropic
  1. Skills
  2. /
  3. k-dense-ai
  4. /
  5. scientific-agent-skills
  6. /
  7. Polars Bio

Polars Bio

Editor's Note

A Polars-native library for genomic interval operations that's 6-38x faster than bioframe on real-world benchmarks. Handles the usual interval arithmetic (overlap, nearest, merge, coverage, complement, subtract) plus reads and writes BED, VCF, BAM, CRAM, GFF, FASTA, and FASTQ files. Built on Apache Arrow and DataFusion, so you get streaming support for datasets that don't fit in memory and native cloud I/O for S3, GCS, and Azure. Ships with both functional and method-chaining APIs, plus a SQL interface if that's your thing. Worth trying if you're doing genomic analysis in Python and already use Polars, or if you're hitting performance walls with existing tools.

Install

npx skills add https://github.com/k-dense-ai/scientific-agent-skills --skill polars-bio
Votes
0
Installs457
GitHub Stars26.9k
Categories
AI & Agent BuildingCloud & Infrastructure
First SeenJun 3, 2026
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