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Built for the Claude Code community with Claude Code by mertbuilds.com

Independent project, not affiliated with Anthropic
mims-harvard avatar

Tooluniverse Multiomic Disease Characterization

mims-harvard/tooluniverse
329 installs1.6k stars
Summary

This is a structured pipeline for pulling together genomics, transcriptomics, proteomics, and pathway data on a disease to build a systems-level picture. It runs nine phases: disease disambiguation first, then layer-by-layer analysis (GWAS hits, gene expression, PPI networks, pathway enrichment, GO terms), followed by cross-layer integration to spot genes that show up across multiple omics types. The skill calculates a multi-omics confidence score and flags druggable targets and biomarker candidates. You'd use this when you need a full molecular workup of a disease rather than chasing a single gene or drug. It's designed to catch concordance across layers, which strengthens findings, and discordance, which reveals regulatory complexity.

Install to Claude Code

npx -y skills add mims-harvard/tooluniverse --skill tooluniverse-multiomic-disease-characterization --agent claude-code

Installs into .claude/skills of the current project.

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Files
SKILL.md

Select a file.

Featured
CodeRabbit
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AI writes the code. CodeRabbit catches the slop.
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inference shell
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Plug Mailtrap into your AI workflow and let it handle the email.
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Agent, run crypto. Access onchain data & trade routes via 1inch.
Install now →
Capacitor - Shared memory for your team’s coding agents.
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Make coding agent sessions - Searchable, Shareable, Vendor-neutral & Scored.
Try For Free →
CodeScene MCP ServerCodeScene MCP Server
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Your agent targets a perfect 10 Code Health score. Deterministic. Every commit.
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one prompt install →
First SeenJun 3, 2026
View on GitHub

More from mims-harvard/tooluniverse

All 68 skills →
  • Tooluniverse Spatial Omics Analysis329
  • Tooluniverse Immune Repertoire Analysis328
  • Tooluniverse Gwas Study Explorer327
  • Tooluniverse Install Skills327
  • Tooluniverse Variant Analysis327
  • Tooluniverse Metabolomics326
  • Tooluniverse Variant Interpretation319
  • Tooluniverse Polygenic Risk Score318
  • Tooluniverse Single Cell293
  • Devtu Self Evolve280
  • Tooluniverse Custom Tool257
  • Devtu Code Optimization239
  • Protein Interaction Network Analysis
  • Tooluniverse Sequence Retrieval1.6k
  • Tooluniverse Literature Deep Research620
  • Tooluniverse Image Analysis617
  • Tooluniverse Clinical Guidelines444
  • Tooluniverse433
  • Tooluniverse Drug Research432
  • Tooluniverse Clinical Trial Design423
  • Tooluniverse Drug Drug Interaction413
  • Setup Tooluniverse408
  • Tooluniverse Disease Research404
  • Tooluniverse Protein Structure Retrieval397

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