This connects Claude to the Human Protein Atlas through Pipeworx's gateway, letting you query protein expression data, tissue distribution, and cellular localization without managing API keys. The source doesn't list specific tools, but it's part of a larger gateway that routes requests through ask_pipeworx, where you phrase questions in plain English and it handles the underlying API calls. You'd reach for this when working with proteomics data, analyzing gene expression patterns, or building biology research workflows. Works via streamable HTTP, so no local installation needed. Can be used standalone or as part of the full Pipeworx gateway with 823+ data sources.
Human Protein Atlas (HPA) MCP — keyless.
Part of Pipeworx — an MCP gateway connecting AI agents to 823+ live data sources.
| Tool | Description |
|---|
Add to your MCP client (Claude Desktop, Cursor, Windsurf, etc.):
{
"mcpServers": {
"protein-atlas": {
"url": "https://gateway.pipeworx.io/protein-atlas/mcp"
}
}
}
Or connect to the full Pipeworx gateway for access to all 823+ data sources:
{
"mcpServers": {
"pipeworx": {
"url": "https://gateway.pipeworx.io/mcp"
}
}
}
Instead of calling tools directly, you can ask questions in plain English:
ask_pipeworx({ question: "your question about Protein Atlas data" })
The gateway picks the right tool and fills the arguments automatically.
MIT