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Built for the Claude Code community with Claude Code by @mertduzgun

Independent project, not affiliated with Anthropic
  1. MCP
  2. /
  3. Plant Genomics

Plant Genomics

Editor's Note

A comprehensive genomics toolkit that wires Claude into 11 plant biology databases: Ensembl Plants, Phytozome, UniProtKB, Europe PMC, QuickGO, NCBI BLAST, Gramene, KEGG, STRING-DB, ATTED-II, and BAR. You pass it a locus identifier like AT1G01010 and get back gene metadata, cross-references, protein records, literature mentions, GO annotations, homology trees, pathway memberships, protein interactions, coexpression neighbors, and tissue-specific expression profiles. The 32 tools split into single lookups, parallel batch operations, and cross-source synthesis calls that merge data from multiple backends. Reach for this when you're doing comparative plant genomics, pathway analysis, or need to pull together fragmented annotations across disparate public repositories without writing custom scrapers for each one.

Install

claude mcp add --transport stdio musharna-plant-genomics-mcp uvx plant-genomics-mcp
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