This is comprehensive guidance for setting up and maintaining clean project structures, covering everything from initial directory layouts to the token-efficient MANIFEST system that can reduce session startup overhead by 85-90%. It shines when you're either starting fresh or inheriting a messy project that needs reorganization. The deprecation strategy is smart: instead of deleting old files, you move them to descriptive deprecated directories with documentation explaining what happened. The strongest part is the integration of practical concerns like making sure your structure plays nice with version control and how to systematically update all file paths when reorganizing. It includes ready-to-use templates for research, development, bioinformatics, and notebook-based workflows.
npx skills add https://github.com/delphine-l/claude_global --skill folder-organization