This server connects Claude to the EMDB (EBI Electron Microscopy Data Bank), a public repository of electron microscopy structural data maintained by the European Bioinformatics Institute. It's part of the Pipeworx gateway, which means you can query cryo-EM structures, retrieve experimental metadata, and search deposited entries without managing API keys. The source doesn't list specific tools, but you can use the ask_pipeworx interface to query in plain English and let the gateway route requests automatically. Reach for this when you need to pull structural biology data, compare EM experiments, or integrate microscopy datasets into research workflows without writing custom API clients.
EMDB (EBI Electron Microscopy Data Bank) MCP — keyless.
Part of Pipeworx — an MCP gateway connecting AI agents to 836+ live data sources.
| Tool | Description |
|---|
Add to your MCP client (Claude Desktop, Cursor, Windsurf, etc.):
{
"mcpServers": {
"emdb": {
"url": "https://gateway.pipeworx.io/emdb/mcp"
}
}
}
Or connect to the full Pipeworx gateway for access to all 836+ data sources:
{
"mcpServers": {
"pipeworx": {
"url": "https://gateway.pipeworx.io/mcp"
}
}
}
Instead of calling tools directly, you can ask questions in plain English:
ask_pipeworx({ question: "your question about Emdb data" })
The gateway picks the right tool and fills the arguments automatically.
MIT
com.mcparmory/google-sheets
domdomegg/google-sheets-mcp
henilcalagiya/google-sheets-mcp
cct15/war-dashboard-data
moooonad/mcp-google-sheets-full
io.github.br0ski777/csv-to-json