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Built for the Claude Code community with Claude Code by @mertduzgun

Independent project, not affiliated with Anthropic
  1. MCP
  2. /
  3. String Db

String Db

Editor's Note

Connects Claude to STRING, the protein interaction database covering roughly 12,000 organisms. You get five tools: resolve for mapping gene names or accessions to STRING IDs, interactions for pulling partner proteins, network for generating visual graphs with tabular data, enrichment for functional annotation against GO/KEGG/Reactome/Pfam, and homology for cross-species mappings. Runs through Pipeworx's gateway as a streamable HTTP service, so no local setup. Useful when you're doing comparative proteomics, pathway analysis, or need to quickly validate whether a set of proteins actually interact based on experimental and predicted data.

Install

claude mcp add --transport http io.github.pipeworx-io-string-db https://gateway.pipeworx.io/string-db/mcp
Registryactive
TransportHTTP
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