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Built for the Claude Code community with Claude Code by @mertduzgun

Independent project, not affiliated with Anthropic
  1. Skills
  2. /
  3. davila7
  4. /
  5. claude-code-templates
  6. /
  7. Scikit Bio

Scikit Bio

Editor's Note

If you're doing microbiome analysis or computational biology in Python, this wraps up the grunt work of sequence manipulation, phylogenetic trees, and diversity calculations. It handles the format hell of FASTA, FASTQ, Newick, and BIOM files, plus gives you UniFrac distances, PCoA ordination, and PERMANOVA tests without reaching for five different packages. The API is clean for common tasks like reverse complements, sequence alignment, and alpha/beta diversity metrics. It's not as comprehensive as Biopython for every conceivable biological format, but for microbial ecology and community analysis workflows, it's more focused and gets you to publication figures faster.

Install

npx skills add https://github.com/davila7/claude-code-templates --skill scikit-bio
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Installs301
GitHub Stars27.7k
Categories
Data Science & ML
First SeenJun 3, 2026
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